STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng26190DBnaAnng26190D protein. (974 aa)    
Predicted Functional Partners:
BnaA07g24510D
BnaA07g24510D protein.
  
 
 0.736
BnaA02g35670D
BnaA02g35670D protein.
  
 
 0.736
BnaA01g17140D
BnaA01g17140D protein.
  
 
 0.552
BnaC01g19960D
BnaC01g19960D protein.
  
 
 0.552
BnaC07g50110D
BnaC07g50110D protein.
  
 
 0.552
BnaA02g17700D
BnaA02g17700D protein; Belongs to the small heat shock protein (HSP20) family.
 
 
 0.530
BnaC05g08860D
BnaC05g08860D protein.
 
    0.520
BnaAnng37590D
BnaAnng37590D protein.
  
     0.518
BnaC03g60930D
BnaC03g60930D protein.
  
     0.517
BnaC02g24240D
BnaC02g24240D protein; Belongs to the small heat shock protein (HSP20) family.
 
 
 0.509
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.