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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA09g52680DBnaA09g52680D protein. (503 aa)    
Predicted Functional Partners:
BnaCnng52460D
BnaCnng52460D protein.
  
 
0.492
BnaC04g12990D
BnaC04g12990D protein.
  
 
  0.457
BnaA09g17240D
BnaA09g17240D protein.
  
 
  0.455
BnaCnng27530D
BnaCnng27530D protein.
  
 
  0.451
BnaA05g11230D
BnaA05g11230D protein.
  
 
  0.442
BnaC03g45080D
BnaC03g45080D protein.
      
 0.442
BnaA06g24960D
BnaA06g24960D protein.
   
    0.436
BnaC03g48610D
BnaC03g48610D protein.
   
    0.436
BnaC03g48620D
BnaC03g48620D protein.
   
    0.436
BnaA05g35340D
BnaA05g35340D protein.
  
 
  0.424
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.