STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng65660DBnaCnng65660D protein. (176 aa)    
Predicted Functional Partners:
BnaA02g17660D
BnaA02g17660D protein.
  
   
 0.628
BnaC02g24200D
BnaC02g24200D protein.
  
   
 0.617
BnaA08g04450D
BnaA08g04450D protein.
  
   
 0.564
BnaCnng76980D
BnaCnng76980D protein.
  
   
 0.563
BnaA07g08170D
BnaA07g08170D protein.
  
   
 0.549
BnaA08g12680D
BnaA08g12680D protein.
  
     0.529
BnaC03g77320D
BnaC03g77320D protein.
  
     0.528
BnaA01g06040D
BnaA01g06040D protein.
  
     0.525
BnaA03g49140D
BnaA03g49140D protein.
  
     0.518
BnaA08g13830D
BnaA08g13830D protein.
  
     0.517
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.