Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng31840DBnaAnng31840D protein. (412 aa)    
Predicted Functional Partners:
BnaA08g12110D
BnaA08g12110D protein.
      
 0.550
BnaC03g67050D
BnaC03g67050D protein.
      
 0.550
BnaCnng02660D
BnaCnng02660D protein.
      
 0.547
BnaA03g01010D
BnaA03g01010D protein.
      
 0.547
BnaA09g40930D
BnaA09g40930D protein.
      
 0.510
BnaA04g14920D
BnaA04g14920D protein.
      
 0.510
BnaA03g51000D
BnaA03g51000D protein.
     
 0.507
BnaA07g24800D
BnaA07g24800D protein.
      
 0.498
BnaC08g44830D
BnaC08g44830D protein.
      
 0.498
BnaA09g10060D
BnaA09g10060D protein.
      
 0.498
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.