STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng64060DBnaCnng64060D protein; Belongs to the protein kinase superfamily. (451 aa)    
Predicted Functional Partners:
BnaA04g10280D
BnaA04g10280D protein.
  
0.926
MKK3.1
Mitogen-activated protein kinase kinase 3.1.
  
0.926
BnaA01g26660D
BnaA01g26660D protein.
    
 0.477
BnaC07g33730D
BnaC07g33730D protein.
      
 0.457
BnaC08g11760D
BnaC08g11760D protein.
    
  0.456
BnaA03g46880D
BnaA03g46880D protein.
    
  0.456
BnaA08g14650D
BnaA08g14650D protein.
    
  0.456
BnaA01g14050D
BnaA01g14050D protein.
    
  0.456
BnaA09g15870D
BnaA09g15870D protein; Belongs to the protein kinase superfamily.
  
 
   0.436
BnaA08g28110D
BnaA08g28110D protein.
  
 
  0.421
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.