STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng31150DGlutathione peroxidase; Belongs to the glutathione peroxidase family. (233 aa)    
Predicted Functional Partners:
BnaC05g26630D
BnaC05g26630D protein.
   
 
 0.920
BnaC04g26180D
Glutathione reductase; Maintains high levels of reduced glutathione.
  
 0.890
BnaAnng31940D
Glutathione reductase; Maintains high levels of reduced glutathione.
  
 0.890
BnaC03g23440D
Thioredoxin reductase.
  
 0.826
BnaC04g02020D
Thioredoxin reductase.
  
 0.826
BnaA03g19550D
Thioredoxin reductase.
  
 0.826
BnaCnng08030D
BnaCnng08030D protein; Belongs to the GST superfamily.
     
 0.812
BnaA02g35980D
BnaA02g35980D protein; Belongs to the GST superfamily.
     
 0.812
BnaA09g16230D
Thioredoxin; Belongs to the thioredoxin family.
   
 0.811
BnaC09g17310D
Thioredoxin; Belongs to the thioredoxin family.
   
 0.811
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.