STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng60480DBnaCnng60480D protein. (324 aa)    
Predicted Functional Partners:
BnaC03g58930D
BnaC03g58930D protein.
  
 
  0.481
BnaA09g54180D
BnaA09g54180D protein.
  
 
  0.480
BnaA04g19980D
BnaA04g19980D protein.
  
 
  0.451
BnaA07g08180D
BnaA07g08180D protein.
  
 
  0.450
BnaC04g44370D
BnaC04g44370D protein.
  
 
  0.441
BnaCnng72530D
BnaCnng72530D protein.
  
 
  0.438
BnaAnng06610D
BnaAnng06610D protein.
  
     0.431
BnaC02g41820D
BnaC02g41820D protein.
  
     0.419
BnaA09g05460D
BnaA09g05460D protein.
  
     0.403
BnaUnng01720D
BnaUnng01720D protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.400
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.