STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA07g37380DBnaA07g37380D protein. (759 aa)    
Predicted Functional Partners:
BnaC03g61200D
BnaC03g61200D protein.
    
 
 0.917
BnaA03g55940D
BnaA03g55940D protein.
    
 
 0.917
BnaC05g04120D
BnaC05g04120D protein.
   
 
 0.881
BnaAnng02010D
BnaAnng02010D protein.
   
 
 0.881
BnaA05g18240D
BnaA05g18240D protein.
   
 
 0.881
BnaC06g15620D
BnaC06g15620D protein.
    
 
 0.864
BnaC06g15610D
BnaC06g15610D protein.
    
 
 0.864
BnaA09g34800D
BnaA09g34800D protein.
    
 
 0.864
BnaCnng03620D
BnaCnng03620D protein.
    
 
 0.862
BnaA10g27290D
BnaA10g27290D protein.
    
 
 0.862
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.