STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng29860DBnaAnng29860D protein. (374 aa)    
Predicted Functional Partners:
BnaC03g35820D
BnaC03g35820D protein.
   
 0.921
BnaA01g32030D
BnaA01g32030D protein.
   
 0.921
BnaC05g43180D
BnaC05g43180D protein.
   
 0.921
BnaA05g28710D
BnaA05g28710D protein.
   
 0.921
BnaA03g00850D
BnaA03g00850D protein.
   
 0.914
BnaC06g14490D
BnaC06g14490D protein.
   
 0.914
BnaC09g42470D
BnaC09g42470D protein.
    
 
 0.882
BnaCnng37640D
BnaCnng37640D protein.
    
 
 0.878
BnaCnng37650D
BnaCnng37650D protein.
    
 
 0.878
BnaA06g02640D
BnaA06g02640D protein.
   
 
 0.864
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.