STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng33260DBnaAnng33260D protein. (136 aa)    
Predicted Functional Partners:
BnaA04g05330D
BnaA04g05330D protein.
    
 0.468
BnaA08g04810D
BnaA08g04810D protein.
    
 
 0.468
BnaC06g02470D
BnaC06g02470D protein.
  
     0.447
BnaA02g16340D
BnaA02g16340D protein.
  
     0.428
BnaC08g02590D
BnaC08g02590D protein.
  
     0.424
BnaA03g52560D
BnaA03g52560D protein.
  
     0.424
BnaA09g55260D
BnaA09g55260D protein.
  
     0.424
BnaC03g66530D
BnaC03g66530D protein.
  
     0.417
BnaA08g02360D
BnaA08g02360D protein.
  
     0.408
BnaA05g35870D
BnaA05g35870D protein.
  
     0.407
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.