Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng30910DBnaAnng30910D protein. (217 aa)    
Predicted Functional Partners:
BnaC03g77050D
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.989
BnaA06g36910D
BnaA06g36910D protein; Belongs to the cyclin family.
   
 0.947
BnaA05g17760D
BnaA05g17760D protein; Belongs to the cyclin family.
   
 0.947
BnaCnng40230D
BnaCnng40230D protein; Belongs to the cyclin family.
   
 0.947
BnaCnng52280D
BnaCnng52280D protein; Belongs to the cyclin family.
   
 0.947
BnaC06g00240D
BnaC06g00240D protein; Belongs to the cyclin family.
   
 0.946
BnaC06g40620D
BnaC06g40620D protein; Belongs to the cyclin family.
   
 0.941
BnaC08g04660D
BnaC08g04660D protein; Belongs to the cyclin family.
   
 0.941
BnaA09g56610D
BnaA09g56610D protein; Belongs to the cyclin family.
   
 0.941
BnaA02g19780D
BnaA02g19780D protein; Belongs to the cyclin family.
   
 0.934
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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