STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC07g51230DBnaC07g51230D protein. (382 aa)    
Predicted Functional Partners:
BnaA06g36240D
Nuclear cap-binding protein subunit 2.
    
 0.580
BnaAnng32060D
BnaAnng32060D protein.
    
 0.541
BnaA06g15930D
BnaA06g15930D protein.
  
 
 0.503
BnaA06g23350D
BnaA06g23350D protein.
    
 0.502
BnaCnng32140D
BnaCnng32140D protein.
      
 0.493
BnaCnng19170D
BnaCnng19170D protein.
  
 
 0.479
BnaA09g00790D
BnaA09g00790D protein.
  
 
 0.473
BnaC08g12040D
BnaC08g12040D protein.
      
 0.467
BnaA05g18780D
BnaA05g18780D protein.
      
 0.467
BnaC05g31760D
BnaC05g31760D protein.
      
 0.467
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (16%) [HD]