STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng33380DBnaAnng33380D protein. (118 aa)    
Predicted Functional Partners:
BnaC04g02010D
BnaC04g02010D protein.
  
 
 0.883
BnaC08g08500D
BnaC08g08500D protein.
  
 0.860
BnaC03g33930D
BnaC03g33930D protein.
   
   0.858
BnaC08g43520D
BnaC08g43520D protein.
    
   0.853
BnaA09g55440D
BnaA09g55440D protein.
    
   0.853
BnaA05g17300D
BnaA05g17300D protein.
  
 0.781
BnaA08g14160D
BnaA08g14160D protein.
  
 0.781
BnaA05g20360D
BnaA05g20360D protein.
  
 0.781
BnaA09g30800D
BnaA09g30800D protein.
  
 0.781
BnaC03g42740D
BnaC03g42740D protein.
  
 0.781
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.