STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng34590DBnaAnng34590D protein. (167 aa)    
Predicted Functional Partners:
BnaC02g01320D
BnaC02g01320D protein.
  
 
  0.585
BnaC04g02510D
BnaC04g02510D protein.
  
 
  0.560
BnaC04g23900D
BnaC04g23900D protein.
  
 
  0.557
BnaA09g30230D
BnaA09g30230D protein.
  
 
  0.556
BnaA04g27560D
BnaA04g27560D protein.
  
 
  0.556
BnaC05g50070D
BnaC05g50070D protein.
  
 
  0.549
BnaCnng25380D
BnaC07g47850D protein.
  
 
  0.548
BnaCnng08440D
BnaCnng08440D protein.
  
   0.544
BnaC04g48140D
BnaC04g48140D protein.
  
     0.540
BnaA05g09870D
BnaA05g09870D protein.
  
     0.539
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.