STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng73500DBnaCnng73500D protein. (194 aa)    
Predicted Functional Partners:
BnaC03g69950D
BnaC03g69950D protein.
      
 0.535
BnaA03g01600D
BnaA03g01600D protein.
      
 0.522
BnaC02g22680D
BnaC02g22680D protein.
      
 0.511
BnaA02g16730D
BnaA02g16730D protein.
      
 0.511
BnaA05g30890D
BnaA05g30890D protein.
      
 0.510
BnaC09g51730D
BnaC09g51730D protein.
      
 0.504
BnaA09g00720D
Endoglucanase.
      
 0.472
BnaA09g51160D
Endoglucanase.
      
 0.472
BnaC08g45970D
Endoglucanase.
      
 0.472
BnaCnng23250D
Endoglucanase.
      
 0.472
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.