STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng71200DBnaCnng71200D protein. (146 aa)    
Predicted Functional Partners:
BnaA01g35330D
BnaA01g35330D protein.
  
   
 0.498
BnaC07g34270D
BnaC07g34270D protein.
  
   
 0.497
BnaC01g41700D
BnaC01g41700D protein.
  
   
 0.496
BnaA06g15970D
BnaA06g15970D protein.
    
 
 0.480
BnaA03g00760D
BnaA03g00760D protein.
    
 
 0.478
BnaA06g39980D
Protein transport protein sec16.
      
 0.465
BnaA06g20090D
BnaA06g20090D protein.
      
 0.438
BnaCnng11940D
BnaCnng11940D protein.
      
 0.438
BnaC01g10240D
BnaC01g10240D protein.
      
 0.433
BnaCnng26510D
BnaCnng26510D protein.
      
 0.433
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.