STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng76300DBnaCnng76300D protein. (253 aa)    
Predicted Functional Partners:
BnaC06g00020D
BnaC06g00020D protein.
    
 0.658
BnaAnng09290D
BnaAnng09290D protein.
    
 0.641
BnaC04g15860D
BnaC04g15860D protein.
    
 0.596
BnaCnng55960D
BnaCnng55960D protein.
    
 0.596
BnaC02g20170D
BnaC02g20170D protein.
  
 
 0.559
BnaA01g37120D
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
 
  0.553
BnaA02g06740D
BnaA02g06740D protein.
  
  0.551
BnaAnng38340D
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
 
  0.551
BnaA10g12810D
BnaA10g12810D protein.
  
  0.549
BnaA01g26070D
BnaA01g26070D protein.
  
    0.548
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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