STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng40490DBnaAnng40490D protein. (353 aa)    
Predicted Functional Partners:
BnaCnng60930D
BnaCnng60930D protein.
  
 
 0.955
BnaA07g04150D
BnaA07g04150D protein.
    
 0.926
BnaA09g08530D
BnaA09g08530D protein.
    
 0.926
BnaA06g32820D
Phosphate transporter; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport. Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.
      
 0.765
BnaAnng14200D
Phosphate transporter; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport. Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.
      
 0.765
BnaA02g18610D
BnaA02g18610D protein.
  
  
 0.569
BnaC04g32950D
BnaC04g32950D protein; Belongs to the precorrin methyltransferase family.
  
  
 0.490
BnaA04g10650D
BnaA04g10650D protein; Belongs to the precorrin methyltransferase family.
  
  
 0.490
BnaCnng57780D
BnaCnng57780D protein.
  
  
 0.475
BnaA05g11030D
BnaA05g11030D protein.
     
 0.457
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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