STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng75540DBnaCnng75540D protein. (175 aa)    
Predicted Functional Partners:
BnaA06g35870D
BnaA06g35870D protein.
      
 0.648
BnaA07g32020D
BnaA07g32020D protein.
      
 0.648
BnaUnng00920D
BnaUnng00920D protein.
      
 0.648
BnaC02g16640D
BnaC02g16640D protein.
  
     0.491
BnaC08g26530D
BnaC08g26530D protein.
  
     0.474
BnaUnng04070D
BnaUnng04070D protein.
  
     0.455
BnaAnng34960D
BnaAnng34960D protein.
  
     0.452
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.