STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng40570DBnaAnng40570D protein. (157 aa)    
Predicted Functional Partners:
BnaC03g69350D
BnaC03g69350D protein.
   
    0.586
BnaA06g01680D
BnaA06g01680D protein.
   
    0.586
BnaC06g41070D
BnaC06g41070D protein.
   
    0.586
BnaC09g01000D
BnaC09g01000D protein.
  
     0.543
BnaCnng08150D
BnaCnng08150D protein.
  
     0.542
BnaA02g17130D
BnaA02g17130D protein.
  
     0.542
BnaA06g15570D
BnaA06g15570D protein.
  
     0.539
BnaC08g22020D
BnaC08g22020D protein.
  
     0.539
BnaC03g66540D
BnaC03g66540D protein.
  
     0.539
BnaA08g11560D
BnaA08g11560D protein.
  
     0.539
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.