STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psaAPhotosystem I P700 chlorophyll a apoprotein A1; Belongs to the PsaA/PsaB family. (750 aa)    
Predicted Functional Partners:
BnaA01g08150D
BnaA01g08150D protein.
  
 
 0.996
BnaA08g30780D
BnaA08g30780D protein.
  
 
 0.996
BnaC09g00220D
BnaC09g00220D protein.
  
 
 0.994
BnaC08g09180D
BnaC08g09180D protein.
  
 
 0.988
BnaA08g07940D
BnaA08g07940D protein.
  
 
 0.988
BnaC05g25250D
BnaC05g25250D protein.
  
 
 0.988
psaI
Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit. Belongs to the PsaI family.
   
 0.983
BnaC04g48350D
BnaA01g34270D protein.
   
 
 0.968
BnaC06g15470D
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
    
 0.966
BnaUnng02420D
BnaC04g15580D protein.
  
 
 0.966
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (12%) [HD]