Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF82711.1 | SHF94079.1 | SAMN05443663_101248 | SAMN05443663_101574 | Outer membrane protein. | Outer membrane protein TolC. | 0.871 |
SHF82711.1 | SHF96980.1 | SAMN05443663_101248 | SAMN05443663_101667 | Outer membrane protein. | Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.614 |
SHF82711.1 | SHF97018.1 | SAMN05443663_101248 | SAMN05443663_101668 | Outer membrane protein. | RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.936 |
SHF82711.1 | SHF97055.1 | SAMN05443663_101248 | SAMN05443663_101669 | Outer membrane protein. | Outer membrane protein TolC. | 0.919 |
SHF82711.1 | SHH40861.1 | SAMN05443663_101248 | SAMN05443663_107187 | Outer membrane protein. | Outer membrane protein TolC. | 0.916 |
SHF82711.1 | SHH48920.1 | SAMN05443663_101248 | SAMN05443663_10822 | Outer membrane protein. | Hydrophobic/amphiphilic exporter-1, HAE1 family/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.691 |
SHF94079.1 | SHF82711.1 | SAMN05443663_101574 | SAMN05443663_101248 | Outer membrane protein TolC. | Outer membrane protein. | 0.871 |
SHF94079.1 | SHF96980.1 | SAMN05443663_101574 | SAMN05443663_101667 | Outer membrane protein TolC. | Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.593 |
SHF94079.1 | SHF97018.1 | SAMN05443663_101574 | SAMN05443663_101668 | Outer membrane protein TolC. | RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.831 |
SHF94079.1 | SHF97055.1 | SAMN05443663_101574 | SAMN05443663_101669 | Outer membrane protein TolC. | Outer membrane protein TolC. | 0.726 |
SHF94079.1 | SHH40861.1 | SAMN05443663_101574 | SAMN05443663_107187 | Outer membrane protein TolC. | Outer membrane protein TolC. | 0.777 |
SHF94079.1 | SHH48920.1 | SAMN05443663_101574 | SAMN05443663_10822 | Outer membrane protein TolC. | Hydrophobic/amphiphilic exporter-1, HAE1 family/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.653 |
SHF96980.1 | SHF82711.1 | SAMN05443663_101667 | SAMN05443663_101248 | Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Outer membrane protein. | 0.614 |
SHF96980.1 | SHF94079.1 | SAMN05443663_101667 | SAMN05443663_101574 | Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Outer membrane protein TolC. | 0.593 |
SHF96980.1 | SHF97018.1 | SAMN05443663_101667 | SAMN05443663_101668 | Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.958 |
SHF96980.1 | SHF97055.1 | SAMN05443663_101667 | SAMN05443663_101669 | Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Outer membrane protein TolC. | 0.944 |
SHF96980.1 | SHG28421.1 | SAMN05443663_101667 | SAMN05443663_102421 | Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.716 |
SHF96980.1 | SHG28459.1 | SAMN05443663_101667 | SAMN05443663_102422 | Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Outer membrane protein TolC. | 0.715 |
SHF96980.1 | SHG37226.1 | SAMN05443663_101667 | SAMN05443663_102649 | Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.717 |
SHF96980.1 | SHH40861.1 | SAMN05443663_101667 | SAMN05443663_107187 | Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Outer membrane protein TolC. | 0.593 |
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