STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF75882.1Protein involved in gliding motility GldM. (513 aa)    
Predicted Functional Partners:
SHF75930.1
Protein involved in gliding motility GldL.
 
 
 
 0.999
SHF75842.1
Protein involved in gliding motility GldN.
 
   
 0.945
SHF75975.1
Protein involved in gliding motility GldK.
 
   
 0.910
SHF75797.1
Protein involved in gliding motility GldN.
 
   
 0.903
SHG51418.1
Protein involved in gliding motility SprE.
  
   
 0.868
SHF83353.1
Protein involved in gliding motility SprA.
  
   
 0.852
SHF90072.1
Probable protein-translocating porin PorT.
  
   
 0.836
SHF78063.1
Protein involved in gliding motility GldB.
  
   
 0.798
SHF87172.1
Protein involved in gliding motility GldJ.
 
   
 0.771
SHH00870.1
Hypothetical protein.
  
     0.731
Your Current Organism:
Flavobacterium defluvii
NCBI taxonomy Id: 370979
Other names: DSM 17963, F. defluvii, Flavobacterium defluvii Park et al. 2007 emend. Chen et al. 2013, Flavobacterium sp. EMB117, KCTC 12612, strain EMB117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.