Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG24870.1 | SHG24901.1 | SAMN05443663_102318 | SAMN05443663_102319 | Voltage-gated potassium channel. | DNA polymerase-3 subunit epsilon. | 0.728 |
SHG24870.1 | SHG55357.1 | SAMN05443663_102318 | SAMN05443663_103160 | Voltage-gated potassium channel. | uroporphyrinogen-III synthase. | 0.606 |
SHG24870.1 | SHG69409.1 | SAMN05443663_102318 | SAMN05443663_103483 | Voltage-gated potassium channel. | uroporphyrinogen-III synthase. | 0.606 |
SHG24870.1 | SHH05844.1 | SAMN05443663_102318 | SAMN05443663_105138 | Voltage-gated potassium channel. | Molybdopterin synthase catalytic subunit. | 0.695 |
SHG24870.1 | SHH37128.1 | SAMN05443663_102318 | SAMN05443663_10795 | Voltage-gated potassium channel. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.741 |
SHG24870.1 | SHH65878.1 | SAMN05443663_102318 | SAMN05443663_109141 | Voltage-gated potassium channel. | Signal transduction histidine kinase. | 0.611 |
SHG24870.1 | SHH84593.1 | SAMN05443663_102318 | SAMN05443663_11353 | Voltage-gated potassium channel. | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.584 |
SHG24870.1 | adk | SAMN05443663_102318 | SAMN05443663_11354 | Voltage-gated potassium channel. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.584 |
SHG24870.1 | miaA | SAMN05443663_102318 | SAMN05443663_102316 | Voltage-gated potassium channel. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.605 |
SHG24870.1 | purL | SAMN05443663_102318 | SAMN05443663_105232 | Voltage-gated potassium channel. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.561 |
SHG24901.1 | SHG24870.1 | SAMN05443663_102319 | SAMN05443663_102318 | DNA polymerase-3 subunit epsilon. | Voltage-gated potassium channel. | 0.728 |
SHG24901.1 | SHH37128.1 | SAMN05443663_102319 | SAMN05443663_10795 | DNA polymerase-3 subunit epsilon. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.554 |
SHG24901.1 | SHH65878.1 | SAMN05443663_102319 | SAMN05443663_109141 | DNA polymerase-3 subunit epsilon. | Signal transduction histidine kinase. | 0.405 |
SHG24901.1 | miaA | SAMN05443663_102319 | SAMN05443663_102316 | DNA polymerase-3 subunit epsilon. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.636 |
SHG55357.1 | SHG24870.1 | SAMN05443663_103160 | SAMN05443663_102318 | uroporphyrinogen-III synthase. | Voltage-gated potassium channel. | 0.606 |
SHG69409.1 | SHG24870.1 | SAMN05443663_103483 | SAMN05443663_102318 | uroporphyrinogen-III synthase. | Voltage-gated potassium channel. | 0.606 |
SHH05844.1 | SHG24870.1 | SAMN05443663_105138 | SAMN05443663_102318 | Molybdopterin synthase catalytic subunit. | Voltage-gated potassium channel. | 0.695 |
SHH37128.1 | SHG24870.1 | SAMN05443663_10795 | SAMN05443663_102318 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | Voltage-gated potassium channel. | 0.741 |
SHH37128.1 | SHG24901.1 | SAMN05443663_10795 | SAMN05443663_102319 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | DNA polymerase-3 subunit epsilon. | 0.554 |
SHH37128.1 | SHH65878.1 | SAMN05443663_10795 | SAMN05443663_109141 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | Signal transduction histidine kinase. | 0.400 |
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