STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG56068.1Outer membrane receptor for ferrienterochelin and colicins. (753 aa)    
Predicted Functional Partners:
SHG56116.1
Thioredoxin-like.
 
     0.562
SHF93770.1
TonB protein C-terminal.
  
  0.558
SHF88214.1
TonB protein C-terminal.
  
  0.543
SHG72715.1
Outer membrane transport energization protein TonB.
   
 0.500
SHG89383.1
Protein TonB.
   
 0.500
SHF88179.1
Hypothetical protein.
   
  0.483
SHF88246.1
Hypothetical protein.
   
  0.483
SHF90758.1
Hypothetical protein.
   
  0.483
SHG34808.1
Hypothetical protein.
   
  0.483
SHH33726.1
Hypothetical protein.
   
  0.483
Your Current Organism:
Flavobacterium defluvii
NCBI taxonomy Id: 370979
Other names: DSM 17963, F. defluvii, Flavobacterium defluvii Park et al. 2007 emend. Chen et al. 2013, Flavobacterium sp. EMB117, KCTC 12612, strain EMB117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.