STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG87874.1Protein of unknown function. (176 aa)    
Predicted Functional Partners:
SHG35858.1
Membrane fusion protein, Cu(I)/Ag(I) efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.914
SHH10505.1
Superoxide dismutase, Cu-Zn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 0.896
SHG87984.1
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
 
 
 0.853
SHG87950.1
Cu2+-exporting ATPase.
 
  0.852
SHG87918.1
Helix-turn-helix domain-containing protein.
 
     0.825
SHG35893.1
Multidrug efflux pump subunit AcrA (membrane-fusion protein).
 
     0.813
SHG37418.1
Cd2+/Zn2+-exporting ATPase.
  
  0.779
SHG28530.1
Cd2+/Zn2+-exporting ATPase.
  
  0.774
SHG35620.1
Copper-resistance protein, CopA family.
 
 
 0.761
SHG35769.1
Cu2+-exporting ATPase.
  
  0.753
Your Current Organism:
Flavobacterium defluvii
NCBI taxonomy Id: 370979
Other names: DSM 17963, F. defluvii, Flavobacterium defluvii Park et al. 2007 emend. Chen et al. 2013, Flavobacterium sp. EMB117, KCTC 12612, strain EMB117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.