STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG93121.1Glycosyltransferase involved in cell wall bisynthesis. (299 aa)    
Predicted Functional Partners:
SHG93163.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.862
SHG93307.1
Glycosyl transferases group 1.
 
 
  0.850
SHG93212.1
dTDP-glucose 4,6-dehydratase/UDP-glucose 4-epimerase.
 
 
  0.848
SHG93074.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.831
SHG93260.1
Galactoside O-acetyltransferase.
 
    0.805
SHG93353.1
Macrocin-O-methyltransferase (TylF).
       0.773
SHH21318.1
Glycosyltransferase, GT2 family.
  
  
  0.770
SHG93450.1
Acetyltransferase (isoleucine patch superfamily).
  
    0.745
SHG93401.1
Hypothetical protein.
       0.741
SHG93497.1
Lipopolysaccharide transport system ATP-binding protein.
 
    0.734
Your Current Organism:
Flavobacterium defluvii
NCBI taxonomy Id: 370979
Other names: DSM 17963, F. defluvii, Flavobacterium defluvii Park et al. 2007 emend. Chen et al. 2013, Flavobacterium sp. EMB117, KCTC 12612, strain EMB117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.