STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG94289.1Hypothetical protein. (342 aa)    
Predicted Functional Partners:
SHG94333.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
     0.802
SHH65878.1
Signal transduction histidine kinase.
  
 0.702
SHG94421.1
N-acetylneuraminate synthase.
 
     0.657
gmd
GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
   
   0.611
SHF88763.1
Thioredoxin reductase (NADPH).
   
  0.593
SHG56029.1
Thioredoxin reductase.
   
  0.593
SHG70731.1
Pyridine nucleotide-disulphide oxidoreductase.
   
  0.593
SHG88324.1
Thioredoxin reductase (NADPH).
   
  0.593
SHH54772.1
Thioredoxin reductase (NADPH)/hypothetical protein.
   
  0.593
SHH24156.1
Glutamate synthase (NADH) large subunit.
    
 
 0.575
Your Current Organism:
Flavobacterium defluvii
NCBI taxonomy Id: 370979
Other names: DSM 17963, F. defluvii, Flavobacterium defluvii Park et al. 2007 emend. Chen et al. 2013, Flavobacterium sp. EMB117, KCTC 12612, strain EMB117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.