STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH09337.1Hypothetical protein. (502 aa)    
Predicted Functional Partners:
SHG85176.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.774
SHG64824.1
Hypothetical protein.
  
     0.744
SHG92170.1
Hypothetical protein.
  
     0.729
SHF87210.1
Peptidase family C25.
  
     0.725
SHG70101.1
Hypothetical protein.
  
     0.717
SHH56990.1
Hypothetical protein.
  
     0.715
SHH85054.1
Hypothetical protein.
  
     0.678
SHF89437.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.618
SHH21162.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.591
SHF89469.1
GLPGLI family protein.
  
     0.553
Your Current Organism:
Flavobacterium defluvii
NCBI taxonomy Id: 370979
Other names: DSM 17963, F. defluvii, Flavobacterium defluvii Park et al. 2007 emend. Chen et al. 2013, Flavobacterium sp. EMB117, KCTC 12612, strain EMB117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.