STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH02944.1Hypothetical protein. (392 aa)    
Predicted Functional Partners:
SHH02909.1
Predicted PurR-regulated permease PerM.
  
    0.801
SHH02983.1
Hypothetical protein.
       0.782
SHH10180.1
DNA-binding transcriptional regulator, MarR family.
  
     0.608
SHG65254.1
PD-(D/E)XK nuclease superfamily protein.
  
     0.589
SHF82945.1
Hypothetical protein.
  
     0.583
SHF88797.1
Precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
    
 0.558
SHF88867.1
Sulfite reductase (ferredoxin).
    
 0.557
SHF88833.1
uroporphyrinogen-III C-methyltransferase.
  
 
 0.540
SHH05958.1
uroporphyrinogen-III C-methyltransferase.
  
 
 0.540
SHH02870.1
Pregnancy-associated plasma protein-A.
       0.517
Your Current Organism:
Flavobacterium defluvii
NCBI taxonomy Id: 370979
Other names: DSM 17963, F. defluvii, Flavobacterium defluvii Park et al. 2007 emend. Chen et al. 2013, Flavobacterium sp. EMB117, KCTC 12612, strain EMB117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.