Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF95428.1 | SHF99984.1 | SAMN05443663_101618 | SAMN05443663_101752 | Predicted dehydrogenase. | Predicted dehydrogenase. | 0.454 |
SHF95428.1 | SHH23266.1 | SAMN05443663_101618 | SAMN05443663_106156 | Predicted dehydrogenase. | Sugar phosphate isomerase/epimerase. | 0.804 |
SHF99984.1 | SHF95428.1 | SAMN05443663_101752 | SAMN05443663_101618 | Predicted dehydrogenase. | Predicted dehydrogenase. | 0.454 |
SHF99984.1 | SHG24999.1 | SAMN05443663_101752 | SAMN05443663_102323 | Predicted dehydrogenase. | Predicted dehydrogenase. | 0.516 |
SHF99984.1 | SHH23266.1 | SAMN05443663_101752 | SAMN05443663_106156 | Predicted dehydrogenase. | Sugar phosphate isomerase/epimerase. | 0.804 |
SHF99984.1 | SHH24851.1 | SAMN05443663_101752 | SAMN05443663_106195 | Predicted dehydrogenase. | Predicted dehydrogenase. | 0.559 |
SHG01012.1 | SHH23266.1 | SAMN05443663_101782 | SAMN05443663_106156 | Sugar or nucleoside kinase, ribokinase family. | Sugar phosphate isomerase/epimerase. | 0.754 |
SHG24999.1 | SHF99984.1 | SAMN05443663_102323 | SAMN05443663_101752 | Predicted dehydrogenase. | Predicted dehydrogenase. | 0.516 |
SHG24999.1 | SHH23266.1 | SAMN05443663_102323 | SAMN05443663_106156 | Predicted dehydrogenase. | Sugar phosphate isomerase/epimerase. | 0.804 |
SHG24999.1 | SHH24851.1 | SAMN05443663_102323 | SAMN05443663_106195 | Predicted dehydrogenase. | Predicted dehydrogenase. | 0.733 |
SHG66021.1 | SHH23266.1 | SAMN05443663_103406 | SAMN05443663_106156 | 2-dehydro-3-deoxygluconokinase. | Sugar phosphate isomerase/epimerase. | 0.754 |
SHG66021.1 | SHH90551.1 | SAMN05443663_103406 | SAMN05443663_1202 | 2-dehydro-3-deoxygluconokinase. | Xylulokinase. | 0.476 |
SHH11901.1 | SHH23266.1 | SAMN05443663_105304 | SAMN05443663_106156 | Predicted dehydrogenase. | Sugar phosphate isomerase/epimerase. | 0.885 |
SHH23266.1 | SHF95428.1 | SAMN05443663_106156 | SAMN05443663_101618 | Sugar phosphate isomerase/epimerase. | Predicted dehydrogenase. | 0.804 |
SHH23266.1 | SHF99984.1 | SAMN05443663_106156 | SAMN05443663_101752 | Sugar phosphate isomerase/epimerase. | Predicted dehydrogenase. | 0.804 |
SHH23266.1 | SHG01012.1 | SAMN05443663_106156 | SAMN05443663_101782 | Sugar phosphate isomerase/epimerase. | Sugar or nucleoside kinase, ribokinase family. | 0.754 |
SHH23266.1 | SHG24999.1 | SAMN05443663_106156 | SAMN05443663_102323 | Sugar phosphate isomerase/epimerase. | Predicted dehydrogenase. | 0.804 |
SHH23266.1 | SHG66021.1 | SAMN05443663_106156 | SAMN05443663_103406 | Sugar phosphate isomerase/epimerase. | 2-dehydro-3-deoxygluconokinase. | 0.754 |
SHH23266.1 | SHH11901.1 | SAMN05443663_106156 | SAMN05443663_105304 | Sugar phosphate isomerase/epimerase. | Predicted dehydrogenase. | 0.885 |
SHH23266.1 | SHH24851.1 | SAMN05443663_106156 | SAMN05443663_106195 | Sugar phosphate isomerase/epimerase. | Predicted dehydrogenase. | 0.804 |
page 1 of 2