Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG28119.1 | SHG28159.1 | SAMN05443663_102413 | SAMN05443663_102414 | His Kinase A (phospho-acceptor) domain-containing protein. | Hypothetical protein. | 0.999 |
SHG28119.1 | SHG32679.1 | SAMN05443663_102413 | SAMN05443663_102532 | His Kinase A (phospho-acceptor) domain-containing protein. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.999 |
SHG28119.1 | SHH09030.1 | SAMN05443663_102413 | SAMN05443663_105222 | His Kinase A (phospho-acceptor) domain-containing protein. | Multi-sensor hybrid histidine kinase. | 0.999 |
SHG28119.1 | SHH19087.1 | SAMN05443663_102413 | SAMN05443663_10657 | His Kinase A (phospho-acceptor) domain-containing protein. | Hypothetical protein. | 0.940 |
SHG28119.1 | SHH42865.1 | SAMN05443663_102413 | SAMN05443663_107244 | His Kinase A (phospho-acceptor) domain-containing protein. | PAS domain S-box-containing protein. | 0.836 |
SHG28119.1 | SHH42911.1 | SAMN05443663_102413 | SAMN05443663_107245 | His Kinase A (phospho-acceptor) domain-containing protein. | Response regulator receiver domain-containing protein. | 0.937 |
SHG28119.1 | SHH65560.1 | SAMN05443663_102413 | SAMN05443663_109131 | His Kinase A (phospho-acceptor) domain-containing protein. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.999 |
SHG28119.1 | SHH65844.1 | SAMN05443663_102413 | SAMN05443663_109140 | His Kinase A (phospho-acceptor) domain-containing protein. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.976 |
SHG28119.1 | SHH65878.1 | SAMN05443663_102413 | SAMN05443663_109141 | His Kinase A (phospho-acceptor) domain-containing protein. | Signal transduction histidine kinase. | 0.999 |
SHG28119.1 | SHH65945.1 | SAMN05443663_102413 | SAMN05443663_109143 | His Kinase A (phospho-acceptor) domain-containing protein. | HAMP domain-containing protein. | 0.962 |
SHG28159.1 | SHG28119.1 | SAMN05443663_102414 | SAMN05443663_102413 | Hypothetical protein. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.999 |
SHG28159.1 | SHG32679.1 | SAMN05443663_102414 | SAMN05443663_102532 | Hypothetical protein. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.999 |
SHG28159.1 | SHH09030.1 | SAMN05443663_102414 | SAMN05443663_105222 | Hypothetical protein. | Multi-sensor hybrid histidine kinase. | 0.999 |
SHG28159.1 | SHH19087.1 | SAMN05443663_102414 | SAMN05443663_10657 | Hypothetical protein. | Hypothetical protein. | 0.999 |
SHG28159.1 | SHH42865.1 | SAMN05443663_102414 | SAMN05443663_107244 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.999 |
SHG28159.1 | SHH42911.1 | SAMN05443663_102414 | SAMN05443663_107245 | Hypothetical protein. | Response regulator receiver domain-containing protein. | 0.983 |
SHG28159.1 | SHH65560.1 | SAMN05443663_102414 | SAMN05443663_109131 | Hypothetical protein. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.999 |
SHG28159.1 | SHH65844.1 | SAMN05443663_102414 | SAMN05443663_109140 | Hypothetical protein. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.999 |
SHG28159.1 | SHH65878.1 | SAMN05443663_102414 | SAMN05443663_109141 | Hypothetical protein. | Signal transduction histidine kinase. | 0.999 |
SHG28159.1 | SHH65945.1 | SAMN05443663_102414 | SAMN05443663_109143 | Hypothetical protein. | HAMP domain-containing protein. | 0.995 |
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