STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH48173.1PRTRC system ThiF family protein. (267 aa)    
Predicted Functional Partners:
SHF85224.1
Sulfur carrier protein ThiS.
  
 0.841
thiG
Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
 
 0.814
SHH05920.1
Molybdopterin synthase subunit MoaD.
  
 0.806
SHH05844.1
Molybdopterin synthase catalytic subunit.
  
 0.800
SHH48249.1
PRTRC system protein E.
 
     0.794
SHH48285.1
Phage/plasmid-like protein TIGR03299.
 
     0.781
SHH05815.1
Cyclic pyranopterin monophosphate synthase subunit MoaC.
    
 0.768
SHG39520.1
Bacteroides conjugative transposon TraM protein.
  
     0.760
SHG39022.1
Relaxase/Mobilisation nuclease domain-containing protein.
  
    0.757
SHG38879.1
Protein of unknown function.
  
    0.753
Your Current Organism:
Flavobacterium defluvii
NCBI taxonomy Id: 370979
Other names: DSM 17963, F. defluvii, Flavobacterium defluvii Park et al. 2007 emend. Chen et al. 2013, Flavobacterium sp. EMB117, KCTC 12612, strain EMB117
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