STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH62762.1Hypothetical protein. (213 aa)    
Predicted Functional Partners:
SHH04644.1
Amino acid adenylation domain-containing protein.
   
 0.824
SHH04603.1
Amino acid adenylation domain-containing protein.
   
 0.731
SHG51540.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 
 0.669
SHF88867.1
Sulfite reductase (ferredoxin).
     
 0.651
SHG17231.1
NAD(P)H-dependent FMN reductase.
  
 0.649
SHH23308.1
NAD(P)H-dependent FMN reductase.
  
 0.649
SHF85674.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
  
 
 0.609
SHH52953.1
ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein.
  
 
 0.603
SHH41403.1
Nitroreductase.
  
 
 0.555
SHH63124.1
Multimeric flavodoxin WrbA.
  
  
  0.553
Your Current Organism:
Flavobacterium defluvii
NCBI taxonomy Id: 370979
Other names: DSM 17963, F. defluvii, Flavobacterium defluvii Park et al. 2007 emend. Chen et al. 2013, Flavobacterium sp. EMB117, KCTC 12612, strain EMB117
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