STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGT94698.1Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (98 aa)    
Predicted Functional Partners:
KGT94697.1
Toxin HigB-2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.993
KGT91782.1
Protein ElaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.673
KGT92475.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.606
KGT95566.1
secY/secA suppressor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.600
vapC
Plasmid maintenance protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
     0.593
KGT95364.1
Growth inhibitor PemK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.487
KGT95528.1
RelE toxin protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.478
KGT94696.1
GMC family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.466
KGT94860.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.446
KGT94734.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.444
Your Current Organism:
Erwinia typographi
NCBI taxonomy Id: 371042
Other names: DSM 22678, E. typographi, Erwinia sp. DSM 22678, Erwinia sp. DSM 24222, Erwinia sp. DSM 24223, Erwinia sp. Y4, Erwinia sp. Y7, Erwinia typographi Skrodenyte-Arbaciauskiene et al. 2012, LMG 25347, LMG:25347, Pantoea sp. Y1, strain Y1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.