STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGT94301.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (365 aa)    
Predicted Functional Partners:
KGT94300.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
KGT94302.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
KGT94303.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.987
KGT92318.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.816
KGT95542.1
Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.814
rbsA-2
Lantibiotic ABC transporter permease; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
  0.813
rbsA
D-ribose transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
  0.811
KGT95905.1
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.810
KGT86434.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.809
KGT86226.1
Lantibiotic ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.809
Your Current Organism:
Erwinia typographi
NCBI taxonomy Id: 371042
Other names: DSM 22678, E. typographi, Erwinia sp. DSM 22678, Erwinia sp. DSM 24222, Erwinia sp. DSM 24223, Erwinia sp. Y4, Erwinia sp. Y7, Erwinia typographi Skrodenyte-Arbaciauskiene et al. 2012, LMG 25347, LMG:25347, Pantoea sp. Y1, strain Y1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.