STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGT92279.1GMC family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (593 aa)    
Predicted Functional Partners:
KGT92278.1
Gluconate 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
KGT92280.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.986
KGT94695.1
Gluconate 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.985
KGT95879.1
Gluconate 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.970
KGT93875.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.969
ghrB
Bifunctional glyoxylate/hydroxypyruvate reductase B; Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. GhrB subfamily.
   
 
 0.947
gntK
Gluconate kinase; Thermoresistant; catalyzes the formation of 6-phospho-D-gluconate from gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.944
KGT94696.1
GMC family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.910
KGT91917.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.894
KGT94734.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.891
Your Current Organism:
Erwinia typographi
NCBI taxonomy Id: 371042
Other names: DSM 22678, E. typographi, Erwinia sp. DSM 22678, Erwinia sp. DSM 24222, Erwinia sp. DSM 24223, Erwinia sp. Y4, Erwinia sp. Y7, Erwinia typographi Skrodenyte-Arbaciauskiene et al. 2012, LMG 25347, LMG:25347, Pantoea sp. Y1, strain Y1
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