STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC34731.1Transposase DDE domain group 1. (120 aa)    
Predicted Functional Partners:
SMC34755.1
EDD domain protein, DegV family.
 
     0.516
SMC31468.1
Rod shape-determining protein MreD.
  
     0.500
SMC34747.1
Hypothetical protein.
       0.499
SMC30273.1
Protein of unknown function.
  
     0.479
SMC34717.1
Type I restriction enzyme, S subunit.
       0.445
SMC30424.1
Sigma-70 region 2; Belongs to the sigma-70 factor family.
  
     0.443
SMC34724.1
Type I restriction enzyme M protein.
       0.435
SMC30079.1
H+-ATPase subunit E/Vma4.
  
     0.416
SMC39128.1
Ribosomal protein S18 acetylase RimI.
  
     0.413
SMC34857.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
  
     0.408
Your Current Organism:
Aerococcus suis
NCBI taxonomy Id: 371602
Other names: Aerococcus suis Vela et al. 2007 emend. Tohno et al. 2014, CCUG 52530, CECT 7139, DSM 21500, JCM 18035
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.