STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC37337.1Uncharacterized protein YpbB. (337 aa)    
Predicted Functional Partners:
SMC37365.1
ATP-dependent DNA helicase RecQ.
 
 
 0.962
SMC37330.1
Riboflavin transporter FmnP; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.
 
     0.768
SMC35965.1
Predicted small secreted protein.
  
     0.701
SMC32325.1
Uncharacterized protein YpmS.
  
     0.609
SMC37374.1
LysM domain-containing protein.
       0.579
cmk
Cytidylate kinase; Non-canonical start codon; manually curated.
       0.578
SMC31499.1
Site-specific DNA-methyltransferase (adenine-specific).
  
     0.552
SMC37572.1
NMDA receptor-regulated protein 1.
  
     0.545
SMC37150.1
Riboflavin biosynthesis RibT protein.
 
     0.531
SMC37450.1
SSU ribosomal protein S1P.
 
     0.529
Your Current Organism:
Aerococcus suis
NCBI taxonomy Id: 371602
Other names: Aerococcus suis Vela et al. 2007 emend. Tohno et al. 2014, CCUG 52530, CECT 7139, DSM 21500, JCM 18035
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