STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC39128.1Ribosomal protein S18 acetylase RimI. (255 aa)    
Predicted Functional Partners:
SMC30273.1
Protein of unknown function.
  
     0.704
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
  
     0.636
SMC30326.1
Hypothetical protein.
  
     0.628
SMC39094.1
Regulator of replication initiation timing; Involved in initiation control of chromosome replication. Belongs to the YabA family.
 
     0.597
SMC43148.1
Hypothetical protein.
  
     0.579
SMC41688.1
Uncharacterized membrane protein YgaE, UPF0421/DUF939 family.
  
     0.563
SMC41632.1
Maltodextrin utilization protein YvdJ.
  
     0.541
rsmI
16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
   
   0.537
SMC44642.1
Transcriptional regulator, GntR family.
  
     0.537
SMC30791.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
     0.510
Your Current Organism:
Aerococcus suis
NCBI taxonomy Id: 371602
Other names: Aerococcus suis Vela et al. 2007 emend. Tohno et al. 2014, CCUG 52530, CECT 7139, DSM 21500, JCM 18035
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.