Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC46418.1 | SMC46432.1 | SAMN04487984_1281 | SAMN04487984_1282 | Chromosome partitioning protein. | Chromosome segregation DNA-binding protein; Belongs to the ParB family. | 0.998 |
SMC46418.1 | SMC46435.1 | SAMN04487984_1281 | SAMN04487984_1283 | Chromosome partitioning protein. | Hypothetical protein. | 0.791 |
SMC46418.1 | SMC46461.1 | SAMN04487984_1281 | SAMN04487984_1285 | Chromosome partitioning protein. | Uncharacterized membrane-anchored protein. | 0.704 |
SMC46418.1 | ychF | SAMN04487984_1281 | SAMN04487984_1284 | Chromosome partitioning protein. | Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.775 |
SMC46432.1 | SMC46418.1 | SAMN04487984_1282 | SAMN04487984_1281 | Chromosome segregation DNA-binding protein; Belongs to the ParB family. | Chromosome partitioning protein. | 0.998 |
SMC46432.1 | SMC46435.1 | SAMN04487984_1282 | SAMN04487984_1283 | Chromosome segregation DNA-binding protein; Belongs to the ParB family. | Hypothetical protein. | 0.788 |
SMC46432.1 | SMC46461.1 | SAMN04487984_1282 | SAMN04487984_1285 | Chromosome segregation DNA-binding protein; Belongs to the ParB family. | Uncharacterized membrane-anchored protein. | 0.704 |
SMC46432.1 | guaA | SAMN04487984_1282 | SAMN04487984_0073 | Chromosome segregation DNA-binding protein; Belongs to the ParB family. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.443 |
SMC46432.1 | ychF | SAMN04487984_1282 | SAMN04487984_1284 | Chromosome segregation DNA-binding protein; Belongs to the ParB family. | Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.752 |
SMC46435.1 | SMC46418.1 | SAMN04487984_1283 | SAMN04487984_1281 | Hypothetical protein. | Chromosome partitioning protein. | 0.791 |
SMC46435.1 | SMC46432.1 | SAMN04487984_1283 | SAMN04487984_1282 | Hypothetical protein. | Chromosome segregation DNA-binding protein; Belongs to the ParB family. | 0.788 |
SMC46435.1 | SMC46461.1 | SAMN04487984_1283 | SAMN04487984_1285 | Hypothetical protein. | Uncharacterized membrane-anchored protein. | 0.719 |
SMC46435.1 | ychF | SAMN04487984_1283 | SAMN04487984_1284 | Hypothetical protein. | Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.877 |
SMC46461.1 | SMC46418.1 | SAMN04487984_1285 | SAMN04487984_1281 | Uncharacterized membrane-anchored protein. | Chromosome partitioning protein. | 0.704 |
SMC46461.1 | SMC46432.1 | SAMN04487984_1285 | SAMN04487984_1282 | Uncharacterized membrane-anchored protein. | Chromosome segregation DNA-binding protein; Belongs to the ParB family. | 0.704 |
SMC46461.1 | SMC46435.1 | SAMN04487984_1285 | SAMN04487984_1283 | Uncharacterized membrane-anchored protein. | Hypothetical protein. | 0.719 |
SMC46461.1 | ychF | SAMN04487984_1285 | SAMN04487984_1284 | Uncharacterized membrane-anchored protein. | Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.776 |
guaA | SMC46432.1 | SAMN04487984_0073 | SAMN04487984_1282 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Chromosome segregation DNA-binding protein; Belongs to the ParB family. | 0.443 |
guaA | lepA | SAMN04487984_0073 | SAMN04487984_0464 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.537 |
guaA | metG | SAMN04487984_0073 | SAMN04487984_0300 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily. | 0.792 |
page 1 of 4