STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC48453.1Conjugative transposon protein TcpC. (299 aa)    
Predicted Functional Partners:
SMC44757.1
Putative ABC transport system permease protein.
  
 0.871
SMC32087.1
Putative ABC transport system permease protein.
  
 0.866
SMC48445.1
Translation elongation factor 2 (EF-2/EF-G).
 
     0.865
SMC45522.1
Putative ABC transport system permease protein.
  
 0.853
SMC30149.1
Putative lysine transport system permease protein.
  
 0.806
SMC48470.1
Mobilisation protein (MobC).
       0.718
SMC48485.1
RepB C-terminus.
       0.417
Your Current Organism:
Aerococcus suis
NCBI taxonomy Id: 371602
Other names: Aerococcus suis Vela et al. 2007 emend. Tohno et al. 2014, CCUG 52530, CECT 7139, DSM 21500, JCM 18035
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.