STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW25910.1PFAM: nitroreductase; KEGG: pla:Plav_3612 hypothetical protein. (211 aa)    
Predicted Functional Partners:
EEW25911.1
KEGG: jan:Jann_2635 hypothetical protein.
       0.576
EEW25909.1
KEGG: rde:RD1_2836 hypothetical protein.
       0.540
EEW23807.1
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: dsh:Dshi_0002 glutamate synthase (ferredoxin).
     
 0.538
EEW25342.1
PFAM: ABC-2 type transporter; KEGG: sme:SM_b20185 hypothetical protein.
  
    0.531
EEW24181.1
PFAM: ABC-2 type transporter; KEGG: mmr:Mmar10_0504 ABC-2 type transporter.
  
    0.531
EEW26720.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; formyl transferase domain protein; Luciferase-like monooxygenase; phosphopantetheine-binding; KEGG: sil:SPO0847 non-ribosomal peptide synthetase.
  
  
 0.509
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
 
 0.506
EEW24289.1
PFAM: Abortive infection protein; KEGG: cph:Cpha266_0281 abortive infection protein.
 
  
 0.489
EEW26619.1
PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sil:SPO0166 N-methylproline demethylase, putative.
  
 
 0.436
EEW26631.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sil:SPO3440 20-beta-hydroxysteroid dehydrogenase, putative; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.416
Your Current Organism:
Rhodobacter sp. SW2
NCBI taxonomy Id: 371731
Other names: R. sp. SW2, Rhodobacter sp. SW 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.