STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW26034.1PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: rde:RD1_2619 peptidoglycan binding domain protein, putative. (531 aa)    
Predicted Functional Partners:
EEW26035.1
PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: pde:Pden_1238 protein of unknown function DUF882.
 
     0.864
lpxD
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
       0.777
EEW26032.1
PFAM: phosphopantetheine-binding; KEGG: dsh:Dshi_1617 phosphopantetheine-binding.
 
     0.773
EEW26031.1
PFAM: Beta-ketoacyl synthase; KEGG: dsh:Dshi_1616 beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.662
EEW24921.1
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sil:SPO0031 ErfK/YbiS/YcfS/YnhG family protein.
  
   
 0.450
EEW25854.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
       0.440
EEW25465.1
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: sil:SPO1354 peptidoglycan binding domain-containing protein.
  
     0.414
Your Current Organism:
Rhodobacter sp. SW2
NCBI taxonomy Id: 371731
Other names: R. sp. SW2, Rhodobacter sp. SW 2
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