STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW23725.1KEGG: mgm:Mmc1_2767 hypothetical protein. (238 aa)    
Predicted Functional Partners:
EEW23724.1
KEGG: sml:Smlt1889 hypothetical protein.
 
     0.957
EEW23726.1
KEGG: dde:Dde_1859 DEAD/DEAH box helicase-like.
       0.773
EEW24383.1
KEGG: oca:OCAR_4822 hypothetical protein.
  
     0.755
EEW24389.1
PFAM: terminase GpA; KEGG: oca:OCAR_4825 phage terminase large subunit (GpA).
  
     0.754
EEW24035.1
PFAM: terminase GpA; KEGG: oca:OCAR_4825 phage terminase large subunit (GpA).
  
     0.751
EEW23759.1
KEGG: mag:amb1168 hypothetical protein.
  
     0.745
EEW24363.1
KEGG: rce:RC1_0064 hypothetical protein.
  
     0.744
EEW23722.1
PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mag:amb1169 bacteriophage tail assembly protein.
  
     0.741
EEW24273.1
KEGG: mag:amb0368 hypothetical protein.
  
     0.739
EEW24032.1
KEGG: oca:OCAR_4822 hypothetical protein.
  
     0.736
Your Current Organism:
Rhodobacter sp. SW2
NCBI taxonomy Id: 371731
Other names: R. sp. SW2, Rhodobacter sp. SW 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.