Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AV530_007918 | CCNG2 | A0A1V4JGT8 | A0A1V4KZ53 | Homeobox domain-containing protein. | Cyclin-G2 isoform B; Belongs to the cyclin family. | 0.439 |
AV530_007918 | HNF1B | A0A1V4JGT8 | A0A1V4K3K6 | Homeobox domain-containing protein. | Hepatocyte nuclear factor 1-beta isoform A. | 0.460 |
AV530_007918 | NEUROG1 | A0A1V4JGT8 | A0A1V4KUL6 | Homeobox domain-containing protein. | Neurogenin-1. | 0.454 |
AV530_007918 | ONECUT3 | A0A1V4JGT8 | A0A1V4KSD9 | Homeobox domain-containing protein. | One cut domain family member 3 isoform B. | 0.893 |
AV530_007918 | ORC3 | A0A1V4JGT8 | A0A1V4JMC3 | Homeobox domain-containing protein. | Origin recognition complex subunit 3 isoform A. | 0.652 |
AV530_007918 | PDX1 | A0A1V4JGT8 | A0A1V4K9P1 | Homeobox domain-containing protein. | Pancreas/duodenum homeobox protein 1. | 0.450 |
AV530_007918 | RBPJ | A0A1V4JGT8 | A0A1V4JFK9 | Homeobox domain-containing protein. | Recombining binding protein suppressor of hairless. | 0.464 |
CCNG2 | AV530_007918 | A0A1V4KZ53 | A0A1V4JGT8 | Cyclin-G2 isoform B; Belongs to the cyclin family. | Homeobox domain-containing protein. | 0.439 |
CCNG2 | ONECUT3 | A0A1V4KZ53 | A0A1V4KSD9 | Cyclin-G2 isoform B; Belongs to the cyclin family. | One cut domain family member 3 isoform B. | 0.439 |
CCNG2 | ORC3 | A0A1V4KZ53 | A0A1V4JMC3 | Cyclin-G2 isoform B; Belongs to the cyclin family. | Origin recognition complex subunit 3 isoform A. | 0.528 |
HNF1B | AV530_007918 | A0A1V4K3K6 | A0A1V4JGT8 | Hepatocyte nuclear factor 1-beta isoform A. | Homeobox domain-containing protein. | 0.460 |
HNF1B | ONECUT3 | A0A1V4K3K6 | A0A1V4KSD9 | Hepatocyte nuclear factor 1-beta isoform A. | One cut domain family member 3 isoform B. | 0.460 |
NEUROG1 | AV530_007918 | A0A1V4KUL6 | A0A1V4JGT8 | Neurogenin-1. | Homeobox domain-containing protein. | 0.454 |
NEUROG1 | ONECUT3 | A0A1V4KUL6 | A0A1V4KSD9 | Neurogenin-1. | One cut domain family member 3 isoform B. | 0.454 |
ONECUT3 | AV530_007918 | A0A1V4KSD9 | A0A1V4JGT8 | One cut domain family member 3 isoform B. | Homeobox domain-containing protein. | 0.893 |
ONECUT3 | CCNG2 | A0A1V4KSD9 | A0A1V4KZ53 | One cut domain family member 3 isoform B. | Cyclin-G2 isoform B; Belongs to the cyclin family. | 0.439 |
ONECUT3 | HNF1B | A0A1V4KSD9 | A0A1V4K3K6 | One cut domain family member 3 isoform B. | Hepatocyte nuclear factor 1-beta isoform A. | 0.460 |
ONECUT3 | NEUROG1 | A0A1V4KSD9 | A0A1V4KUL6 | One cut domain family member 3 isoform B. | Neurogenin-1. | 0.454 |
ONECUT3 | ORC3 | A0A1V4KSD9 | A0A1V4JMC3 | One cut domain family member 3 isoform B. | Origin recognition complex subunit 3 isoform A. | 0.652 |
ONECUT3 | PDX1 | A0A1V4KSD9 | A0A1V4K9P1 | One cut domain family member 3 isoform B. | Pancreas/duodenum homeobox protein 1. | 0.450 |
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