Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AV530_002661 | AV530_014114 | A0A1V4KZR3 | A0A1V4KDB9 | Heterogeneous nuclear ribonucleoprotein C-like. | Heterogeneous nuclear ribonucleoprotein K. | 0.976 |
AV530_002661 | HNRNPA2B1 | A0A1V4KZR3 | A0A1V4KC40 | Heterogeneous nuclear ribonucleoprotein C-like. | Heterogeneous nuclear ribonucleoproteins A2/B1 isoform B. | 0.969 |
AV530_002661 | HNRNPD | A0A1V4KZR3 | A0A1V4JUV0 | Heterogeneous nuclear ribonucleoprotein C-like. | Heterogeneous nuclear ribonucleoprotein D0. | 0.857 |
AV530_002661 | NCL | A0A1V4KZR3 | A0A1V4KME8 | Heterogeneous nuclear ribonucleoprotein C-like. | Nucleolin. | 0.783 |
AV530_002661 | PABPN1L | A0A1V4KZR3 | A0A1V4K1B7 | Heterogeneous nuclear ribonucleoprotein C-like. | Embryonic polyadenylate-binding protein 2. | 0.680 |
AV530_002661 | SNRPD1 | A0A1V4KZR3 | A0A1V4K784 | Heterogeneous nuclear ribonucleoprotein C-like. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.848 |
AV530_002661 | SNRPF | A0A1V4KZR3 | A0A1V4KPX6 | Heterogeneous nuclear ribonucleoprotein C-like. | Small nuclear ribonucleoprotein F. | 0.881 |
AV530_002661 | SNRPG | A0A1V4KZR3 | A0A1V4KR77 | Heterogeneous nuclear ribonucleoprotein C-like. | Small nuclear ribonucleoprotein G. | 0.846 |
AV530_002661 | SRSF2 | A0A1V4KZR3 | A0A1V4KWH4 | Heterogeneous nuclear ribonucleoprotein C-like. | Serine/arginine-rich splicing factor 2. | 0.772 |
AV530_002661 | UBC | A0A1V4KZR3 | A0A1V4K2F8 | Heterogeneous nuclear ribonucleoprotein C-like. | Polyubiquitin-C isoform A. | 0.599 |
AV530_014114 | AV530_002661 | A0A1V4KDB9 | A0A1V4KZR3 | Heterogeneous nuclear ribonucleoprotein K. | Heterogeneous nuclear ribonucleoprotein C-like. | 0.976 |
AV530_014114 | HNRNPA2B1 | A0A1V4KDB9 | A0A1V4KC40 | Heterogeneous nuclear ribonucleoprotein K. | Heterogeneous nuclear ribonucleoproteins A2/B1 isoform B. | 0.976 |
AV530_014114 | HNRNPD | A0A1V4KDB9 | A0A1V4JUV0 | Heterogeneous nuclear ribonucleoprotein K. | Heterogeneous nuclear ribonucleoprotein D0. | 0.804 |
AV530_014114 | NCL | A0A1V4KDB9 | A0A1V4KME8 | Heterogeneous nuclear ribonucleoprotein K. | Nucleolin. | 0.767 |
AV530_014114 | SNRPD1 | A0A1V4KDB9 | A0A1V4K784 | Heterogeneous nuclear ribonucleoprotein K. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.569 |
AV530_014114 | SNRPF | A0A1V4KDB9 | A0A1V4KPX6 | Heterogeneous nuclear ribonucleoprotein K. | Small nuclear ribonucleoprotein F. | 0.455 |
AV530_014114 | SNRPG | A0A1V4KDB9 | A0A1V4KR77 | Heterogeneous nuclear ribonucleoprotein K. | Small nuclear ribonucleoprotein G. | 0.457 |
AV530_014114 | SRSF2 | A0A1V4KDB9 | A0A1V4KWH4 | Heterogeneous nuclear ribonucleoprotein K. | Serine/arginine-rich splicing factor 2. | 0.782 |
HNRNPA2B1 | AV530_002661 | A0A1V4KC40 | A0A1V4KZR3 | Heterogeneous nuclear ribonucleoproteins A2/B1 isoform B. | Heterogeneous nuclear ribonucleoprotein C-like. | 0.969 |
HNRNPA2B1 | AV530_014114 | A0A1V4KC40 | A0A1V4KDB9 | Heterogeneous nuclear ribonucleoproteins A2/B1 isoform B. | Heterogeneous nuclear ribonucleoprotein K. | 0.976 |
page 1 of 4