STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPDHeterogeneous nuclear ribonucleoprotein D0. (329 aa)    
Predicted Functional Partners:
AV530_002661
Heterogeneous nuclear ribonucleoprotein C-like.
   
 0.857
HNRNPA2B1
Heterogeneous nuclear ribonucleoproteins A2/B1 isoform B.
  
0.811
SRSF2
Serine/arginine-rich splicing factor 2.
  
 0.806
AV530_014114
Heterogeneous nuclear ribonucleoprotein K.
   
 0.804
SNRPD1
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.747
PABPN1L
Embryonic polyadenylate-binding protein 2.
  
 0.744
SNRPF
Small nuclear ribonucleoprotein F.
   
 0.739
SNRPG
Small nuclear ribonucleoprotein G.
   
 0.736
UBC
Polyubiquitin-C isoform A.
   
 0.735
NCL
Nucleolin.
  
0.733
Your Current Organism:
Patagioenas fasciata
NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis
Server load: low (18%) [HD]