STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV530_018125Sodium/potassium ATPase inhibitor SPAI-2-like. (76 aa)    
Predicted Functional Partners:
AV530_006198
Complement C1q subcomponent subunit C-like.
    
  0.578
SETDB1
Histone-lysine N-methyltransferase SETDB1.
    
 0.553
AV530_015237
Uncharacterized protein; Belongs to the tubulin family.
    
 0.514
AV530_010730
Uncharacterized protein.
    
 0.510
WDR18
WD repeat-containing protein 18.
    
  0.506
FLII
Flightless-1-like protein.
    
 
 0.505
RPS27A
Ubiquitin-40S ribosomal protein S27a.
    
  0.501
AV530_000478
GRANULINS domain-containing protein.
    
 
 0.478
GRN
Granulins.
    
 
 0.478
POT1
Protection of telomeres protein 1.
    
  0.477
Your Current Organism:
Patagioenas fasciata
NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.