STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV530_000286Uncharacterized protein. (84 aa)    
Predicted Functional Partners:
MYL3
Myosin light chain 3.
   
 0.800
MYL6
Myosin light polypeptide 6.
   
 0.782
MYL1
Myosin light chain 1/3, skeletal muscle.
   
 0.782
MYL9
Myosin regulatory light polypeptide 9.
   
 0.778
AV530_006249
Myosin regulatory light chain 2, smooth muscle minor isoform.
   
 0.778
TNNI2-2
Troponin I, fast skeletal muscle.
   
 0.698
TNNI1
Troponin I, slow skeletal muscle.
   
 0.697
AV530_018479
Myosin regulatory light chain 2A, cardiac muscle isoform.
   
 0.691
MYL10
Myosin regulatory light chain 10.
   
 0.691
TNNC2
Troponin C, skeletal muscle.
   
 0.659
Your Current Organism:
Patagioenas fasciata
NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.