Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yoaEPutative transmembrane protein; COG_category P;COG_number COG0861, COG1253; YoaE. (529 aa)    
Predicted Functional Partners:
htpX
Heat shock protein, peptidase family M48; COG_category O;COG_number COG0501; HtpX.
    0.861
yeaZ
Putative glycoprotein endopeptidase, M22 peptidase; COG_category O;COG_number COG1214; YeaZ.
  
    0.814
sppA
Protease IV, a signal peptide peptidase; COG_category O;COG_number COG0616; SppA.
      0.698
nuoCD
NADH dehydrogenase I chain C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
       0.568
pgl
6-phosphogluconolactonase, cycloisomerase 2 family; COG_category G;COG_number COG2706; Pgl.
  
     0.471
ybeY
Predicted metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
    0.442
yaeT
Outer membrane protein precursor; COG_category J;COG_number COG4775; YaeT.
  
    0.432
Your Current Organism:
Buchnera aphidicola BCc
NCBI taxonomy Id: 372461
Other names: B. aphidicola BCc, Buchnera aphidicola str. Cc (Cinara cedri)
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